6bcn_A : 3D-footprint complex

structure name	I-LTRI E184D BOUND TO COGNATE SUBSTRATE (PRE-CLEAVAGE COMPLEX) (Ribosomal protein 3homing endonuclease-like fusion protein)
reference	McMurrough et al. 'Nucleic 46 11990 2018
source	Leptographium truncatum
experiment	X-ray (resolution=2.50, R-factor=0.239)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
multimeric complexes	6bcn_AC
reference complex	6bce_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6bcn_A interface=16,18,20,22,27,32,34,36,38,66,68,70,72,171,173,175,177,179,181,182,187,189,193,195,217,219,221,223,229, nispwtitgfadaesSfMlTvSkdskRntgwSvRpRfRiglhnkdvtilksireylgagiitsdiDaRiRfEslkelevvinhfdkyplitqkradyllfkkafyliknkehlteeglnqiltlkaslnlglseelkeafpntipaerllvtgqeipdsnwvagftagdgSfYiRiAkNsTLktgyQvQsvfQiTqdtrdielmknlisylncgniRiRkHtCvdlvvTnlndikekiipffnknhiigvklqdyrdwckvvtlidnkehltseglekiqkikegmnrgrs
interface signature	SMTSRSRRRDRRESYRANTLQQQTRRHCT

Estimated binding specificities ?

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# IC=19.887 IC/col=0.947 n_of_columns=21

specificity:

A |   9   0  96  96  96  10   0   0   0   0  24  24  24  24   0   0  77   0   0  86   9
C |  57   0   0   0   0  86   0   0  96   0  24  24  24  24   0   0   0   0  96   0  78
G |   9   0   0   0   0   0  96   0   0  96  24  24  24  24  96  96   0  96   0   9   0
T |  21  96   0   0   0   0   0  96   0   0  24  24  24  24   0   0  19   0   0   1   9

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updated Fri Jan 9 05:33:24 2026