6c66_BCDEFHO : 3D-footprint complex

structure name	CRISPR RNA-GUIDED SURVEILLANCE COMPLEX, PRE-NICKING
source	THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX)
experiment	NMR
reference complex	5u07_D 5u0a_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6c66_B interface=170,182,184,186,187,188, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlfylpvpaidelaaiadehrdavakilpadritevlksrnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 6c66_C interface=114,172,174,214,215,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 6c66_D interface=114,174,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 6c66_E interface=172,174,203,215,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa > 6c66_F interface=174,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa > 6c66_H interface=114,172,174, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttsagtfyryanvnldrlventgdaqtartavaeflraflstvpstlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa > 6c66_O interface=151, twltkivpdlryrqtradfrtagnlhrklirlssdlgeerianprqqsgllfrieetrnelyllvqshsplrvdrlgpgyhgvqmrnldpflarldkgsrvryrivasptkrlgrsenntqrlglkrgaaaeewwhsraaanglellstyAqtlddvrdpgtadrsrkirhpavrfdgeavisdvdavrhavlngigrgksygcgllslali
interface signature	FHSHMN/VMADHSHMN/VASHMN/MAFHSHMN/ASHMN/VMA/A

Estimated binding specificities ?

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# IC=29.726 IC/col=1.025 n_of_columns=29

specificity:

A |   0  96   0  96   0   4  24   0  96   0  84  24   6   0   0  96   0   4  24   0  96   0   4  24  84   0   0  96   4
C |   0   0  96   0   0  82  24  96   0  96   4  24   4   0  96   0   0   6  24  96   0  96   4  24   4   0  96   0  84
G |  96   0   0   0  96   4  24   0   0   0   4  24  82  96   0   0   0   4  24   0   0   0   6  24   4   0   0   0   4
T |   0   0   0   0   0   6  24   0   0   0   4  24   4   0   0   0  96  82  24   0   0   0  82  24   4  96   0   0   4

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updated Sat Dec 14 10:09:59 2024