6dbt_AD : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS
reference	Liao et al. 'Nat. 25 732 2018
source	DANIO RERIO / ESCHERICHIA COLI, DANIO RERIO
experiment	X-ray (resolution=4.30, R-factor=?)
structural superfamily	Galactose oxidase, central domain;
reference complex	6dbj_A 6dbj_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6dbt_A interface=3,14,17,18,113,116,586, ggRprqhllsltrRaqKHrlrdlknqvktfaekeeggdvksvcltlfllalragnehkqadeleammqgrgfglhpavclairvntflscsqyhkmyrtvkatsgrqifqplHtlRnaekellpgfhqfewqpalknvstswdvgiidglsgwtvsvddvpadtisrrfrydvalvsalkdleedimeglreralddsmctsgftvvvkescdgmgdvsekpekavrfsftimsisirlegeddgitifqeqkpnselscrplclmfvdesdhetltailgpvvaerkammesrliisvggllrsfrfffrgtgydekmvremegleasgstyictlcdstraeasqnmvlhsitrshdenleryeiwrknpfsesadelrdrvkgvsakpfmetqptldalhcdignatefykifqdeigevyqkpnpsreerrrwrstldkqlrkkmklkpvmrmngnyarrlmtreaveavcelvpseerreallklmdlylqmkpvwrstcpsrdcpdqlcqysynsqqfadllssmfkyrydgkitnylhktlahvpeiverdgsigawasegnesgnklfrrfrkmnarQsktfeledilkhhwlytskylqkfmeah > 6dbt_D interface= msLqpltavncgsLvqPGfslldlegdvylfgqkgwpkrscptgifgvrikkgelklraisfsnnssylpplrcpaiahfeaqdgkpecylihggrtpnnelssslymlsvdSrgCnrkvtlrceekelvgdvpsaryghtlsvinsrgktacvlfggrsymppterttqnwnsvvdcppqvylidlefgcctahtlpeltdgqsfhvalarqdcvyflgghilssdcrpsrlirlhvelllgspvltctilhegltitsaiaspigyheyiifggyqsetqkrmectyvglddvgvhmesreppqwtseishsrtwfggslgkgtalvaipsegnptppeayhfyqvsfq
interface signature	RRKHHRQ/LLPGSC

readout + contact

# IC=5.339 IC/col=0.890 n_of_columns=6

A |   0   0   9   9   0  11
C |   0   0  11   9   0   9
G |   0   0   9   9  96   9
T |  96  96  67  69   0  67

home
updated Tue Sep 10 11:52:27 2024