Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameCRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS
referenceLiao et al. 'Nat. 25 732 2018
experimentX-ray (resolution=4.29, R-factor=?)
structural superfamilyGalactose oxidase, central domain;
reference complex6dbj_A 6dbj_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRHHHRQS/N

Estimated binding specificities ?

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# IC=9.784 IC/col=0.296 n_of_columns=33 specificity:   
A |   0   0   0   5   0   0  15  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  66   1  24  24   6
C |   5   0   0   6   0   0   6  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  15  90  24  24  80
G |   6   0   0   5   0  96   5  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   5   0  24  24   5
T |  85  96  96  80  96   0  70  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  10   5  24  24   5
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updated Tue Jan 6 02:08:56 2026