Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameCRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS
referenceLiao et al. 'Nat. 25 732 2018
experimentX-ray (resolution=4.29, R-factor=?)
structural superfamilyGalactose oxidase, central domain;
reference complex6dbj_A 6dbj_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRHHHRQS/N

Estimated binding specificities ?

contactlogo
# IC=8.506 IC/col=0.258 n_of_columns=33 specificity:   
A |   5  24  24   5  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  67   0  96  67  96  96  84
C |   7  24  24   5  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   7  96   0  13   0   0   5
G |  79  24  24  79  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  11   0   0  11   0   0   2
T |   5  24  24   7  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  11   0   0   5   0   0   5
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updated Thu Jun 25 13:16:29 2026