interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS AND 23-RSS SUBSTRATE DNAS
referenceLiao et al. 'Nat. 25 732 2018
sourceDANIO RERIO / ESCHERICHIA COLI, DANIO RERIO
experimentX-ray (resolution=4.29, R-factor=?)
structural superfamilyGalactose oxidase, central domain;
reference complex6dbj_A 6dbj_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureN/RRAHHRQ

Estimated binding specificities ?

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# IC=9.295 IC/col=0.404 n_of_columns=23 specificity:   
A |   0  16  16   0   0   8  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0   0
C |   0   8   0   0   0   8  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96   0   0
G |   0  16  16   0  96   8  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  96
T |  96  56  64  96   0  72  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  96   0
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updated Tue Sep 10 11:54:24 2024