interface graph thumbnail
legend  pdf

structure nameCRYO-EM STRUCTURE OF RAG IN COMPLEX WITH 12-RSS SUBSTRATE DNA
referenceLiao et al. 'Nat. 25 732 2018
sourceESCHERICHIA COLI, DANIO RERIO
experimentX-ray (resolution=4.20, R-factor=?)
structural superfamilyGalactose oxidase, central domain;
reference complex6dbj_A 6dbj_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNMR/L/RRHHRR

Estimated binding specificities ?

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# IC=5.300 IC/col=0.482 n_of_columns=11 specificity:   
A |  11   9  24  24  24  96   0  24  67  24  96
C |  67   9  24  24  24   0  96  24   9  24   0
G |   9  11  24  24  24   0   0  24  11  24   0
T |   9  67  24  24  24   0   0  24   9  24   0
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updated Sat Dec 14 10:47:43 2024