6df5_A : 3D-footprint complex

structure name	KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Stanfield et al. Biochemistry ? ? 2020
source	Homo sapiens
experiment	X-ray (resolution=1.82, R-factor=0.214)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6df5_A interface=26,27,30,52,54,55,58,80,81,82,114,116, dhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY
interface signature	TSRLEYKNYQRY

readout + contact

# IC=7.734 IC/col=0.967 n_of_columns=8

A |  14   7   0   0   0   0   0  59
C |   9  75  96   0   0  96  88   7
G |   7   7   0   0  96   0   0  16
T |  66   7   0  96   0   0   8  14

home
updated Tue Dec 17 03:44:48 2024