6df5_A : 3D-footprint complex

structure name	KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Stanfield et al. Biochemistry ? ? 2020
source	Homo sapiens
experiment	X-ray (resolution=1.82, R-factor=0.214)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6df5_A interface=26,27,30,52,54,55,58,80,81,82,114,116, dhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqY
interface signature	TSRLEYKNYQRY

readout + contact

# IC=8.147 IC/col=1.018 n_of_columns=8

A |  19   0   0   0  96   0   0  57
C |  19   0   0  96   0   0   0   9
G |   9  96  96   0   0  96  86   9
T |  49   0   0   0   0   0  10  21

home
updated Thu Sep 12 23:05:57 2024