interface graph thumbnail
legend  pdf

structure nameKAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS), PH 6.5
(Transcriptional regulator Kaiso)
referenceStanfield et al. Biochemistry ? ? 2020
sourceHomo sapiens
experimentX-ray (resolution=2.54, R-factor=0.184)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex2lt7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTSRLEYNYQRY

Estimated binding specificities ?

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# IC=7.875 IC/col=0.984 n_of_columns=8 specificity:   
A |  10  10  10   0   0   0   1  96
C |  10  64  85   0   0  96  85   0
G |  23  12   0   0  96   0  10   0
T |  53  10   1  96   0   0   0   0
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updated Thu Sep 12 23:06:03 2024