6dfa_A : 3D-footprint complex

structure name	KAISO (ZBTB33) E535A ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH THE SPECIFIC KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Stanfield et al. Biochemistry ? ? 2020
source	Homo sapiens
experiment	X-ray (resolution=1.91, R-factor=0.183)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6dfa_A interface=27,28,31,53,55,56,81,82,83,115,117, ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaAYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl
interface signature	TSRLAYNYQRY

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# IC=7.771 IC/col=0.971 n_of_columns=8

A |  11   8   0   0   0   0   0  88
C |   8  69  87   0   0  96  78   0
G |   8   8   1   0  96   0   8   8
T |  69  11   8  96   0   0  10   0

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updated Tue Dec 17 03:45:13 2024