6e33_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PHO7-DNA COMPLEX (Uncharacterized transcriptional regulatory protein C27B12.11c)
reference	Goldgur et al. 'Nucleic 46 11262 2018
source	Schizosaccharomyces pombe (strain 972 / ATCC 24843) / Schizosaccharomyces pombe (strain 972 / ATCC 24843)
experiment	X-ray (resolution=1.71, R-factor=0.189)
structural superfamily	Zn2/Cys6 DNA-binding domain;
sequence family	Fungal Zn2Cys6 binuclear cluster domain;
reference complex	6o19_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6e33_A interface=6,9,20,21,22,48,54,57, gkvkkRlpQakracakcqkDNKkcddarpcqrcikaktdcidlprkkRptgvrRgpYk
interface signature	RQDNKRRY

Estimated binding specificities ?

readout + contact

# IC=10.307 IC/col=0.859 n_of_columns=12

specificity:

A |   6   0   0   0  90   6  24  24   0   0  89  68
C |  13  96   0   0   0  84  24  24   7  90   7   6
G |   6   0  96  96   6   6  24  24   0   0   0   6
T |  71   0   0   0   0   0  24  24  89   6   0  16

scan!

home
updated Thu Sep 12 23:11:43 2024