6edb_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SRY.HCGAS-21BP DSDNA COMPLEX
reference	Glickman et al. Proc.Natl.Acad.Sci.USA 116 11946 2019
source	HOMO SAPIENS
experiment	X-ray (resolution=3.21, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6edb_A interface=13, klravleklklsRddistaagmvkgvvdhlllrlkcdsafrgvgllntgsyyehvkisapnefdvmfklevpriqleeysntrayyfvkfkrnpkenplsqflegeilsaskmlskfrkiikeeindikdtdvimkrkrggspavtllisekisvditlalesksswpastqeglriqnwlsakvrkqlrlkpfylvpkhakegngfqeetwrlsfshiekeilnnhgksktccenkeekccrkdclklmkylleqlkerfkdkkhldkfssyhvktaffhvctqnpqdsqwdrkdlglcfdncvtyflqclrteklenyfipefnlfssnlidkrskefltkqieyernnefpvfd > 6edb_B interface=2,5,7,8,15,27,31, kRpmNaFIvwsrdqRrkmalenprmrNseiSkqlgyqwkmlteaekwpffqeaqklqamhrekypny
interface signature	R/RNFIRNS

Estimated binding specificities ?

readout + contact

# IC=3.438 IC/col=0.246 n_of_columns=14

specificity:

A |  13  78   7   1  20  22  22  24  24  24  24  24   9  13
C |  56   6   7   2  20  22  22  24  24  24  24  24  69  56
G |  13   6   7   1  36  25  25  24  24  24  24  24   9  13
T |  14   6  75  92  20  27  27  24  24  24  24  24   9  14

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updated Wed Jul 30 16:37:03 2025