6en8_DF : 3D-footprint complex

structure name	SAFADR IN COMPLEX WITH DSDNA
reference	'Nat 10 1542 2019
source	Sulfolobus acidocaldarius
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	6en8_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6en8_D interface=34,35,37,39,40, eslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktidvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltp > 6en8_F interface=41,42,44,46,47, pktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmlt
interface signature	AYLYF/AYLYF

Estimated binding specificities ?

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# IC=9.701 IC/col=0.970 n_of_columns=10

specificity:

A |   0   0   0  13  96   0   0  16  18  96
C |   0   0   5  16   0   0   0  56  11   0
G |   0   0   5  56   0  96   0  13  56   0
T |  96  96  86  11   0   0  96  11  11   0

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updated Tue Sep 10 12:28:00 2024