6en8_DF : 3D-footprint complex

structure name	SAFADR IN COMPLEX WITH DSDNA
reference	'Nat 10 1542 2019
source	Sulfolobus acidocaldarius
experiment	X-ray (resolution=3.29, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	6en8_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6en8_D interface=34,35,37,39,40, eslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktidvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmltp > 6en8_F interface=41,42,44,46,47, pktekgkeslnkildasveliadkgflstsinditskagvAYgLfYFyfkskhdildeiirqfnrnmryylktytqnldsridvekvgmkkflewmnenkkyykifietqvhrpdiykwhfmklaeryttglseamrrgeiinvdpellsyvligiahmlgkryvlwsnsgltlkqqrdldliienmlt
interface signature	AYLYF/AYLYF

Estimated binding specificities ?

readout + contact

# IC=9.435 IC/col=0.944 n_of_columns=10

specificity:

A |   0  14  14  96   0   0  14  81  96  92
C |   0  62  16   0  96   0  54   4   0   0
G |   0   9  57   0   0   0  14   7   0   4
T |  96  11   9   0   0  96  14   4   0   0

scan!

home
updated Sat Dec 14 11:21:07 2024