interface graph thumbnail
legend  pdf

structure nameKLENTAQ DNA POLYMERASE PROCESSING A MODIFIED PRIMER - BEARING THE MODIFICATION UPSTREAM AT THE SIXTH PRIMER NUCLEOTIDE.
(DNA polymerase I, thermostable)
referenceDiederichs et al. 'Proc. 115 9992 2018
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.198)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNRQH

Estimated binding specificities ?

readout + contactlogo
# IC=3.902 IC/col=0.780 n_of_columns=5 specificity:   
A |   0  21   0   0  10
C |   0  23  96  86  23
G |  96  10   0   0  42
T |   0  42   0  10  21
scan!

home
updated Sat Aug 2 11:03:53 2025