6g1t_A : 3D-footprint complex

structure name	TRAN, A REPRESSOR OF AN ENTEROCOCCUS CONJUGATIVE TYPE IV SECRETION SYSTEM (AM32)
reference	Goessweiner-Mohr et al. 'Nucleic 46 9201 2018
source	ENTEROCOCCUS FAECALIS
experiment	X-ray (resolution=1.93, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6g1t_A interface=21,22,23,26,27,30,75,77,80,81,85,86,100, gkinlnqiytakemserigkNRNylSQayRnnkheilknfnyrkiggtiifsdnpnndlsqlitakeasqllgkNdEyfAHiykRFphrlegidhiytgKtlfltkeslevfkkk
interface signature	NRNSQRNEAHRFK

Estimated binding specificities ?

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# IC=12.471 IC/col=0.779 n_of_columns=16

specificity:

A |  96   0   0   0  24  11  56  24  24  24  16   0  84   0  96  96
C |   0   0   0   0  24  12  16  24  24  24  11   0   0  96   0   0
G |   0   0  96   0  24  11  13  24  24  24  13  96  12   0   0   0
T |   0  96   0  96  24  62  11  24  24  24  56   0   0   0   0   0

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updated Fri Sep 13 21:47:02 2024