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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Wed Jul 30 18:39:15 2025

structure name	THE CRYSTAL STRUCTURE OF SE-ASFVLIG:DNA COMPLEX
reference	Chen et al. 'Nat 10 387 2019
source	African swine fever virus
experiment	X-ray (resolution=2.55, R-factor=?)
structural superfamily	DNA ligase/mRNA capping enzyme, catalytic domain;Nucleic acid-binding proteins;
reference complex	6imj_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6imj_A interface=89,109, mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgKknattvvhqafkdalskynRharqkrrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqanaktdsselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgkdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelspgiplqaravgfrepinvleii > 6imj_B interface=89,109,113, mlnqfpgqysnnifcfppiesetksgkkaswiicvqvvqhntiipitdemfstdvkdavaeiftkffveegavriskmtrvtegknlgKknattvvhqafkdalskynRharQkrrgmippmlvkyfniipktffeeetdpivqrkrngvravacqqgdgcillysrtekeflgldnikkelkqlylfidvrvyldgelylhrkplqwiagqanaksselhfyvfdcfwsdqlqmpsnkrqqlltnifkqkedltfihqvenfsvknvdealrlkaqfikegyegaivrnangpyepgynnyhsahlaklkplldaefilvdytqgkkgkdlgailwvcelpnkkrfvvtpkhltyadryalfqkltpalfkkhlygkeltveyaelsptgiplqaravgfrepinvleii