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structure nameCRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA VAL1 IN COMPLEX WITH FLC DNA FRAGMENT
(B3 domain-containing transcription repressor VAL1)
referenceHu et al. Nat.Plants 5 424 2019
sourceArabidopsis thaliana
experimentX-ray (resolution=2.92, R-factor=0.206)
structural superfamilyDNA-binding pseudobarrel domain;
sequence familyB3 DNA binding domain;
reference complex6fas_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRVWNNM

Estimated binding specificities ?

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# IC=4.644 IC/col=0.774 n_of_columns=6 specificity:   
A |   7  85   8   0   2  42
C |  81   3   7   0  88  18
G |   4   3   7  96   2  18
T |   4   5  74   0   4  18
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updated Thu Sep 12 23:48:11 2024