structure name | CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA TRANSCRIPTION FACTOR LEC2- DNA COMPLEX (B3 domain-containing transcription factor LEC2) |
reference | Hu et al. Nat.Plants 5 424 2019 |
source | Arabidopsis thaliana |
experiment | X-ray (resolution=3.10, R-factor=0.226) |
structural superfamily | DNA-binding pseudobarrel domain; |
sequence family | B3 DNA binding domain; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SRWNM |
Estimated binding specificities ?
readout + contact |
A | 10 74 0 0 0 42 C | 64 0 0 0 96 23 G | 12 1 0 96 0 10 T | 10 21 96 0 0 21scan! |
Dendrogram of similar interfaces ?
matrix format--ST--RG--WCNC------MA---- L +-6j9c_D +--3 --STITRGVTWCNCNT----MA---- L ! +-6fas_B ! --STITRGVTWCNCNG----MA---- L +-------------------5 +5yzz_C ! ! +-1 --STHG------RG--PT--RG---- L ! ! ! +6ycq_A ! +--4 KASTLTRGITWCNTNT----MA---- L --6 ! +6j9b_A ! +-2 --STHG--ST--RC--PT--RG---- L ! +6sdg_B ! ----ECECIG--------KGNGRGLC L +------------------------4rd5_A |
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updated Tue Dec 19 13:18:48 2023