6ny1_Y : 3D-footprint complex

structure name	CASX-GRNA-DNA(30BP) STATE II (CASX)
source	DELTAPROTEOBACTERIA BACTERIUM
experiment	NMR
redundant complexes	6ny2_Y 6ny3_Y
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ny1_Y interface=22,26,126,130,131,165,170,200,204,212,216,488,494,495,595, ekrinkirkklsadnatkpvsRsgpMktllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaqpasxxxxxxxxxxxxxxxxxxxxxxxXxxxXXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgkfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsDacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvnlnlwqklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlqkwygdlrgnpfaveaenrvvdisgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvaltferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanlsrgfqytkmedwltaklayegltsktylsktlaqytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrfshrpvqeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk
interface signature	RMXXXRYKDSKSQYR

Estimated binding specificities ?

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# IC=9.298 IC/col=1.033 n_of_columns=9

specificity:

A |  11  96   9   9  96   0   0  96  96
C |  67   0  11  11   0   0   0   0   0
G |   9   0  67  67   0   0  96   0   0
T |   9   0   9   9   0  96   0   0   0

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updated Fri Sep 13 22:47:01 2024