6ny2_Y : 3D-footprint complex

structure name	CASX-GRNA-DNA(45BP) STATE I (CASX)
source	DELTAPROTEOBACTERIA BACTERIUM
experiment	NMR
redundant complexes	6ny1 6ny3
reference complex	6ny1_Y
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ny2_Y interface=26,28,127,131,161,165,170,200,212,216,279,280,284,459,488,494,495,595,618,724,728,730,737,742,769,770,808,813,840,852, ekrinkirkklsadnatkpvsrsgpMkTllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaqpasxxxxxxxxxxxxxxxxxxxxxxxxXxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgKfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsdacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvNLnlwQklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlQkwygdlrgnpfaveaenrvvdisgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvalTferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanLsrgFgRqgkrtfMterqYtkmedwltaklayegltsktylsktlAQytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxrfshrpvQeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk
interface signature	MTXXKRYKSKNLQQSQYRTLFRMYAQXXXQ

Estimated binding specificities ?

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# IC=17.232 IC/col=0.821 n_of_columns=21

specificity:

A |   0   0   0  96   0   3  12   0  10  24  24  10  10  24   0   0   0   8  24   7  96
C |   0   0  96   0   0  89  64   0  12  24  24   8  66  24   0  96  96  75  24   8   0
G |   0   0   0   0   0   2  12   0  64  24  24  70  10  24   0   0   0   6  24  75   0
T |  96  96   0   0  96   2   8  96  10  24  24   8  10  24  96   0   0   7  24   6   0

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updated Fri Sep 13 01:10:56 2024