6ny2_Y : 3D-footprint complex

structure name	CASX-GRNA-DNA(45BP) STATE I (CASX)
source	DELTAPROTEOBACTERIA BACTERIUM
experiment	NMR
redundant complexes	6ny1 6ny3
reference complex	6ny1_Y
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ny2_Y interface=26,28,127,131,161,165,170,200,212,216,279,280,284,459,488,494,495,595,618,724,728,730,737,742,769,770,808,813,840,852, ekrinkirkklsadnatkpvsrsgpMkTllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaqpasxxxxxxxxxxxxxxxxxxxxxxxxXxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgKfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsdacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvNLnlwQklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlQkwygdlrgnpfaveaenrvvdisgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvalTferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanLsrgFgRqgkrtfMterqYtkmedwltaklayegltsktylsktlAQytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxXxxxxrfshrpvQeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk
interface signature	MTXXKRYKSKNLQQSQYRTLFRMYAQXXXQ

Estimated binding specificities ?

contact

# IC=17.495 IC/col=0.833 n_of_columns=21

specificity:

A |   0  75  24   6   0   0   0  24  12   6  24  24   8  96  10   2  96   0   0  96  96
C |   0   6  24   8   0   0  96  24   8  74  24  24  68   0   8   2   0   0   0   0   0
G |  96   7  24   8   0   0   0  24  64   8  24  24  10   0  70  90   0   0  96   0   0
T |   0   8  24  74  96  96   0  24  12   8  24  24  10   0   8   2   0  96   0   0   0

scan!

home
updated Sat Aug 2 13:07:04 2025