6ny3_Y : 3D-footprint complex

structure name	CASX TERNARY COMPLEX WITH 30BP TARGET DNA (CASX)
source	DELTAPROTEOBACTERIA BACTERIUM
experiment	NMR
reference complex	6ny1_Y
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ny3_Y interface=22,26,99,102,127,131,165,170,200,204,212,216,459,482,488,494,495,595,618,724,728,730,737,742,770,852, ekrinkirkklsadnatkpvsRsgpMktllvrvmtddlkkrlekrrkkpevmpqvisnnaannlrmllddytkmkeailqvywqefkddhvglmckfaQpaSxxxxxxxxxxxxxxxxxxxxxxxxXxxxXxxxxxxxxxxxxxxxxxxxxxxxxxxxxgkfgqRaldfYsihvtkesthpvkplaqiagnryasgpvgKalsDacmgtiaSflsKyqdiiiehqkvvkgnqkrleslrelagkenleypsvtlppqphtkegvdayneviarvrmwvnlnlwqklklsrddakpllrlkgfpsfpvverrenevdwwntinevkklidakrdmgrvfwsgvtaekrntilegynylpnendhkkrenpkkpakrqfgdlllylekkywgkvfdeaweridkkiagltshiereearnaedaqskavltdwlrakasfvlerlkemdekefyaceiqlQkwygdlrgnpfaveaenrvvdiSgfsigSdghsiQYrnllawkylengkrefyllmnygkkgrirftdgtdikksgkwqgllygggkakvidltfdpddeqliilplafgtrqgrefiwndllsletgliklangRviektiynkkigrdepalfvalTferrevvdpsnikpvnligvargenipavialtdpegcplrigegykekqraiqaakeveqrraggysrkfasksrnladdmvrnsardlfyhavthdavlvfanLsrgFgRqgkrtfMterqYtkmedwltaklayegltsktylsktlaQytsktcsncgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxrfshrpvQeqfvcldcghevhaaeqaalniarswlflnsnstefksyksgkqpfvgawqafykrrlkevwk
interface signature	RMQSXXRYKDSKQSSQYRTLFRMYQQ

Estimated binding specificities ?

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# IC=15.894 IC/col=0.935 n_of_columns=17

specificity:

A |   0   0   0   4   4  13  24  13  13  96  24   0  96   0   0  96  96
C |   0   0  96   4   4  61  24  10  56   0  24   0   0   0   0   0   0
G |   0   0   0   6  82  14  24  65  13   0  24  96   0   0  96   0   0
T |  96  96   0  82   6   8  24   8  14   0  24   0   0  96   0   0   0

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updated Fri Sep 13 01:11:24 2024