structure nameCRYO-EM STRUCTURE OF ESCHERICHIA COLI RNAP POLYMERASE BOUND TO RPSTP2 PROMOTER DNA
sourceESCHERICHIA COLI
experimentNMR
structural superfamilyInsert subdomain of RNA polymerase alpha subunit;C-terminal domain of RNA polymerase alpha subunit;RBP11-like subunits of RNA polymerase;
reference complex3iyd_A 7c97_K 8y6u_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureP/RTA/MMLNRLKFERYKSTYTWWRQRHLTRERRQ/R

Estimated binding specificities ?

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# IC=15.112 IC/col=0.487 n_of_columns=31 specificity:   
A |  96  96  96   0  24   0   0  18  24  24  24  12  24  24  24  24  24  24  24  24  24  24  24  24  24  18   0   0  96  96   0
C |   0   0   0   0  24  96   0  42  24  24  24  12  24  24  24  24  24  24  24  24  24  24  24  24  24  18   0  96   0   0   0
G |   0   0   0  96  24   0  96  18  24  24  24  18  24  24  24  24  24  24  24  24  24  24  24  24  24  48   0   0   0   0   0
T |   0   0   0   0  24   0   0  18  24  24  24  54  24  24  24  24  24  24  24  24  24  24  24  24  24  12  96   0   0   0  96
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updated Sat Dec 14 17:27:22 2024