structure nameCRYO-EM STRUCTURE OF ESCHERICHIA COLI RNAP POLYMERASE BOUND TO RPSTP2 PROMOTER DNA
sourceESCHERICHIA COLI
experimentNMR
structural superfamilyInsert subdomain of RNA polymerase alpha subunit;C-terminal domain of RNA polymerase alpha subunit;RBP11-like subunits of RNA polymerase;
reference complex3iyd_A 6psq_M 7c97_K 8y6u_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRP/RTA/DVRMMRWWQRHLTRERRQ/R

Estimated binding specificities ?

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# IC=13.245 IC/col=0.473 n_of_columns=28 specificity:   
A |  96   0   0   0  96  12  24  24  24  24  24  24  24  24  24  24  24  24  24  64  24  24  14  12   0   0   0   0
C |   0   0   0   0   0  60  24  24  24  24  24  24  24  24  24  24  24  24  24   8  24  24  16  12  96  96  96   0
G |   0   0   0  96   0  12  24  24  24  24  24  24  24  24  24  24  24  24  24  12  24  24  58  58   0   0   0   0
T |   0  96  96   0   0  12  24  24  24  24  24  24  24  24  24  24  24  24  24  12  24  24   8  14   0   0   0  96
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updated Wed Jul 30 22:56:08 2025