6p7b_ABC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FOWLPOX VIRUS RESOLVASE AND SUBSTRATE HOLLIDAY JUNCTION DNA COMPLEX
reference	Banerjee et al. 'Sci 10 393 2020
source	Fowlpox virus
experiment	X-ray (resolution=3.32, R-factor=?)
structural superfamily	Ribonuclease H-like;
reference complex	6p7b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6p7b_A interface=65, miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvilekqgfKspnskiiyfikgffynsntkvivrnptfkggsyrnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesllk > 6p7b_B interface=61,64,69,73,90,94,98,99, miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvileKqgFkspnSkiiYfikgffynsntkvivrNptfKggsYRnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesll > 6p7b_C interface=61,62,64,69,72,73, miicsvdigiknpayaifnydntsntikliaieksdwtknwersvardltrynpdvvileKQgFkspnSkiIYfikgffynsntkvivrnptfkggsyrnrkkqsidvfiqkiseytdykndilnkytklddiansfnlglsymesll
interface signature	K/KFSYNKYR/KQFSIY

Estimated binding specificities ?

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# IC=8.745 IC/col=0.397 n_of_columns=22

specificity:

A |   6  78  24  24   6   0  24   0   0  24   0   6  24  24  24  24  24  24  24  24  24  78
C |  78   6  24  24   6  96  24   0   0  24  96   6  24  24  24  24  24  24  24  24  24   6
G |   6   6  24  24   6   0  24   0   0  24   0  78  24  24  24  24  24  24  24  24  24   6
T |   6   6  24  24  78   0  24  96  96  24   0   6  24  24  24  24  24  24  24  24  24   6

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updated Tue Sep 10 18:20:19 2024