6pbd_AB : 3D-footprint complex

structure name	DNA N6-ADENINE METHYLTRANSFERASE CCRM IN COMPLEX WITH DOUBLE-STRANDED DNA OLIGONUCLEOTIDE CONTAINING ITS RECOGNITION SEQUENCE GAATC
reference	Woodcock et al. 'Nat 10 4600 2019
source	Caulobacter vibrioides
experiment	X-ray (resolution=2.34, R-factor=?)
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	6pbd_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6pbd_A interface=31,34,36,37,38,42,44,45,46,50,52,53,57,58,63,93,94,122,123,124,125,126,128,129,135,173,191,193, mkfgpetiihgdcieqmnalpeksvdlifaDppYnLQLggdLlRPDnskVdAVddhWDqfesFaaydkftrewlkaarrvlkddgaiwvigsYHnifrvgvavqdlgfwilndivwrksnpMPNFKgTRfanahEtliwasksqnakrytfnydalkmandevqmrsdwtipLctgeerikgadgqkahpTqKpeallyrvilsttkpgdvildpffgvgttgaaakrlgrkfigiereaeylehakariakvvpiapedraeprvpfgtiveagllspgdtlycskgthvakvrpdgsitvgdlsgsihkigalvqsapacngwtywhfktdaglapidvlraqvragm > 6pbd_B interface=79,84,85,243,247,292,303,305, fgpetiihgdcieqmnalpeksvdlifadppynlqlsfaaydkftrewlkaarrvlkddgaiwvigsyhnifrvgvavQdlgfWIlndivwrksnpmpnfkgtrfanahetliwasksqnakrytfnydalkmandevqmrsdwtiplctgeerikgadgqkahptqkpeallyrvilsttkpgdvildpffgvgttgaaakrlgrkfigiereaeylehakariakvvpiapedldvmgskRaepRvpfgtiveagllspgdtlycskgthvakvrpdgsitvgdlsgsiHkigalvqsapAcNgwtywhfktdaglapidvlraqvrag
interface signature	DYLQLLRPDVAVWDFYHMPNFKTRELTK/QWIRRHAN

contact

# IC=7.720 IC/col=1.287 n_of_columns=6

A |   2   0  96  96   0   0
C |   2   0   0   0   0  96
G |   2  96   0   0   0   0
T |  90   0   0   0  96   0

home
updated Tue Jan 6 10:29:57 2026