6px1_C : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	SET2 BOUND TO NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6nzo_ABCDEFGHS 6px1_ABCDEFGH 6px3_ABCDEFGHS
redundant complexes	6nzo_C 6px3_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6px1_C interface=27, grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk

  
  --RA----                               +1zla_C    
                     +-------------------3 
  --RG----         +-8                   +5x0y_G    
                   ! ! 
  --RT----         ! +--------------------8grq_A    
                   ! 
  --RA--RA       +-9                     +6a5l_g    
                 ! !      +--------------1 
  --RG----       ! ! +----5              +8txv_G    
                 ! ! !    ! 
  --RG----       ! +-7    +--------------8jla_C    
                 !   ! 
  --RT----     -10   !                   +8u14_G    
                 !   +-------------------2 
  --RG----       !                       +8ox0_C    
                 !  
  --RG--RG       !                +------8kcb_A    
                 !    +-----------4 
  ----RA--       +----6           +------6g0l_D    
                      ! 
  LCRT----            +------------------8hr1_E

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updated Sun Aug 3 12:49:25 2025