6px1_C : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	SET2 BOUND TO NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1eqz_ABCDEFGH 6nzo_ABCDEFGHS 6px1_ABCDEFGH 6px3_ABCDEFGHS
redundant complexes	1eqz_A 6nzo_C 6px3_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6px1_C interface=27, grssraglqfpvgrvhrllrkgnyaeRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlavrndeelnkllgrvtiaqggvlpniqsvllpk

  
  HGRTRG--       +-----------------------------8rbx_V    
                 ! 
  ----RARA       !                             +6a5l_g    
                 !              +--------------1 
  ----RC--     --9              !              +7yqk_C    
                 !      +-------5 
  ----RT--       !      !       !              +8u14_G    
                 !      !       +--------------2 
  ----RG--       !      !                      +8upf_G    
                 +------8 
  ----RG--              !          +-----------8txv_G    
                        !  +-------4 
  ----RC--              !  !       +-----------7ux9_E    
                        +--7 
  ----RGRG                 !             +------8kcb_A    
                           ! +-----------3 
  ----RA--                 +-6           +------7e9c_F    
                             ! 
  ----RT--                   +------------------6px1_A

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updated Sat Jan 10 11:28:05 2026