6q2b_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM LISTERIA MONOCYTOGENES COMPLEXED WITH 26MER DNA
reference	Midwest Center for Structural Genomics (MCSG)
source	Listeria monocytogenes
experiment	X-ray (resolution=2.72, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	6q2b_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6q2b_A interface=48,58,59,60,63,84, mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTasRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy > 6q2b_B interface=48,58,59,60,62,63,84, mkdilrdigviaraldsisniefkelnlakgqfiylvricenqgiiqEklvdilkidRTTaSRaiknlekngliikkqnknnkKnkllfptekgqqlypliireneysnavalkgfteaeinmltdalkkvkeniaddwlyvkkgnkrsy
interface signature	ERTTRK/ERTTSRK

Estimated binding specificities ?

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# IC=16.149 IC/col=0.807 n_of_columns=20

specificity:

A |  96   0   1  21   0   0   7   0  24  24  24  24   0   0  96  74   5  88  90   3
C |   0   1   1   5   5   0   0  96  24  24  24  24   0  44   0   3  61   1   1   3
G |   0   0   2  63   3   0  88   0  24  24  24  24  96   1   0  11  11   1   1   4
T |   0  95  92   7  88  96   1   0  24  24  24  24   0  51   0   8  19   6   4  86

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updated Tue Jan 6 11:14:39 2026