6qhd_AB : 3D-footprint complex

structure name	LYSINE ACETYLATED AND TYROSINE PHOSPHORYLATED STAT3 IN A COMPLEX WITH DNA
reference	Zarivach et al. 'Biochim 1863 1343 2019
source	Homo sapiens
experiment	X-ray (resolution=2.85, R-factor=?)
structural superfamily	p53-like transcription factors;STAT;SH2 domain;
reference complex	1bg1_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6qhd_A interface=196,312,313,314,316, vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgdsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviKtgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqrcaslivteelhlitfetevyhqglkidlethslpvvviSNIcQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwveqiqsvepytkqqlnnmsfaeiimgylvsplvylypdipkeeafgycraplktkficvtp > 6qhd_B interface=195,310,311,312,313,314, vvtekqqmleqhlqdvrkrvqdleqkmkvvenlqddfdfnyktlksqgsvtrqkmqqleqmltaldqmrrsivselagllsameyvqktltdeeladwkrrqqiaciggppnicldrlenwitslaesqlqtrqqikkleelqqkvsykgdpivqhrpmleerivelfrnlmksafvverqpcmpmhpdrplviKtgvqfttkvrllvkfpelnyqlkikvcidkdsgdvaalrgsrkfnilgtntkvmnmeesnngslsaefkhltlreqraslivteelhlitfetevyhqglkidlethslpvvviSNICQmpnawasilwynmltnnpknvnfftkppigtwdqvaevlswqfssttkrglsieqlttlaekllgpysgcqitwakfckenmagkgfsfwvwldniidlvkkyilalwnegyimgfiskererailstkppgtfllrfsesskeggvtftwvetqiqsvepytkqqlnnmsfaeiimgykiilvsplvylypdipkeeafgycraplktkficvtp
interface signature	KSNIQ/KSNICQ

Estimated binding specificities ?

readout + contact

# IC=9.033 IC/col=1.004 n_of_columns=9

specificity:

A |   8   0   8   0   8   0   0  96  56
C |   8   0  88  96  32   0   0   0  16
G |   0   0   0   0  48  96   0   0  16
T |  80  96   0   0   8   0  96   0   8

scan!

home
updated Tue Sep 10 19:08:12 2024