interface graph thumbnail
legend  pdf

structure nameARABIDOPSIS NF-Y/CCAAT-BOX COMPLEX
(NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-6)
referenceChaves-Sanjuan et al. 'Plant 105 49 2021
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.50, R-factor=0.202)
sequence familyCCAATbinding transcription factor CBFB/N;
multimeric complexes6r2v_ABC
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHRRRF

Estimated binding specificities ?

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# IC=7.099 IC/col=1.014 n_of_columns=7 specificity:   
A |  16  13  96   0   0   0   0
C |  13  13   0   0   0   0   0
G |  54  54   0   0   0  96  96
T |  13  16   0  96  96   0   0
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updated Fri Sep 13 23:23:25 2024