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3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Mon Dec 18 17:44:39 2023

structure name	PMAR-LIG_PRE. (ATP-dependent DNA ligase)
reference	Leiros et al. 'Nucleic 47 7147 2019
source	Prochlorococcus marinus str. MIT 9302
experiment	X-ray (resolution=2.75, R-factor=0.190)
structural superfamily	DNA ligase/mRNA capping enzyme, catalytic domain;Nucleic acid-binding proteins;
sequence family	ATP dependent DNA ligase domain;
reference complex	6rar_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6ras_I interface=226,381,423, elfkeeiihqlelhpsrldkekiiseamedgiddffegirmaldplvtfgvkivpekeseksqnflwedfrklanklmqreltghaardailtamesatkeewngfyrrvlikdlacgvsektinkiakkfpkyaipifscplahdsanhekkmigkkqieikldgvrvltiirqnkvemfsrngkqfhnfghiileienvlkedpapydlvldgevmsanfqdlMkqvhrkdgkqtkdavlhlfdlcplenfqkgrwntkqtarsllvkkwvakhslllkhiqtlewenvdldtiqgqkrfvelnksaveggyegvmikdpdgmyeckrthswlkakpfievtlkvvsveegtgrnkgrlgailvegeddgyeyslscgSgfsdiqreeywskrkhllgqlveiradaktkskdgvafslrFprfkcfrgfk