interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE LLFPG PROTEIN, A THF-DNA AND AN INHIBITOR
(Formamidopyrimidine-DNA glycosylase)
referenceGoffinont et al. 'Int 21 ? 2020
sourceLactococcus lactis subsp. cremoris
experimentX-ray (resolution=2.25, R-factor=0.160)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
multimeric complexes4cis_AB
reference complex6fl1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMERFR

Estimated binding specificities ?

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# IC=4.055 IC/col=1.014 n_of_columns=4 specificity:   
A |   0   0   0  19
C |   0   0   0  19
G |   0   0   0  19
T |  96  96  96  39
scan!

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updated Mon Dec 18 17:51:09 2023