6sje_BCD : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE RECBCD CHI PARTIALLY-RECOGNISED COMPLEX
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;Restriction endonuclease-like;
reference complex	6sjf_B 6sjf_C 6sjf_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6sje_B interface=60,126,130,134,146,148,150,248,333,336,404,405,541,542,566,724,743,806,889,904, aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtFteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftiHgfcQrmlNlnafesgmlfeQqLiEdesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddMlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsySglqptltphqfprgAspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag > 6sje_C interface=37,39,40,43,62,63,64,65,66,67,70,84,88,133,136,137,140,141,186,443,492,650,651,652,653,663,664,665,666,685,706,708,712,715,875,878,879,882,1073,1078,1079,1080,1081,1082, mlrvyhsnrldvlealmefivererlddpfepemilVqSTgmAqwlqmtlsqkfgiaanidFPLPASfiWdmfvrvlpeipkeSafnKqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaaDlfDQylVYrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhRanlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrRarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrYlrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerISQRflagpvnicTLMPmrsipfkvvcllgmndgvYprqlaplgfdlmsqkpkrgdRsRrddDryLflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfrtedseipdtepfilegLsrYQinQqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflQayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq > 6sje_D interface=3,39,232,237,238,239,245,295,296,477,530,550,551, avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgAQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss
interface signature	FHQNQLEIFMFRRSRHRRSA/VSTAFPLPASWSKDDQVYRRYISQRTLMPYRRDLLYQQQNMMVR/EEHAQPRVERHPV

Estimated binding specificities ?

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# IC=39.708 IC/col=0.584 n_of_columns=68

specificity:

A |   0   0   6   0   0   0   0   0  24   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  18  24  18   0   0   0   0   0   0   0   0  24   0   0   0   0   0   0   0   0   0  24  24   0
C |   0   0  18   0   0   0   0   0  24   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   6  24  12  96   0   0   0   0   0   0   0  24   0  96   0   0   0   0   0   0   0  24  24   0
G |   0   0   0   0   0   0   0   0  24   0   0   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  54  24  18   0   0   0   0   0   0   0   0  24  96   0   0  96  96   0  96  96   0  24  24   0
T |  96  96  72  96  96  96  96  96  24  96  96  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  18  24  48   0  96  96  96  96  96  96  96  24   0   0  96   0   0  96   0   0  96  24  24  96

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updated Tue Sep 10 20:38:32 2024