6t1f_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE C-TERMINALLY TRUNCATED CHROMOSOME- PARTITIONING PROTEIN PARB FROM CAULOBACTER CRESCENTUS COMPLEXED TO THE CENTROMERIC PARS SITE
reference	Moreno-Herrero et al. Elife 10 ? 2021
source	Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N)
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	KorB DNA-binding domain-like;ParB/Sulfiredoxin;
reference complex	6t1f_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6t1f_A interface=115,125,126,127,130,131,134,157,179,180,183, sreapieilqrnpdtfreedledlsnsirekgvlqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapn > 6t1f_B interface=113,123,124,125,128,129,132,155,177,178,181, sreapieilqrnpdqprrtfreedledlsnslqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapnl
interface signature	QSRSANRRVRE/QSRSANRRVRE

Estimated binding specificities ?

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# IC=18.994 IC/col=1.187 n_of_columns=16

specificity:

A |   0   0   0   0   0   0  96  24  24   0   0  96  96  96   0  96
C |   0   0   0   0   0  96   0  48  12   0   0   0   0   0  96   0
G |   0  96   0   0   0   0   0  12  48   0  96   0   0   0   0   0
T |  96   0  96  96  96   0   0  12  12  96   0   0   0   0   0   0

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updated Sat Dec 14 20:31:05 2024