6t1f_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE C-TERMINALLY TRUNCATED CHROMOSOME- PARTITIONING PROTEIN PARB FROM CAULOBACTER CRESCENTUS COMPLEXED TO THE CENTROMERIC PARS SITE
reference	Moreno-Herrero et al. Elife 10 ? 2021
source	Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N) / Caulobacter vibrioides (strain NA1000 / CB15N)
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	KorB DNA-binding domain-like;ParB/Sulfiredoxin;
reference complex	6t1f_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6t1f_C interface=119,129,130,131,134,135,138,161,183,184,187, sreapieilqrnpdqprrtfreedledlsnsirekgvlqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarkapn > 6t1f_D interface=113,123,124,125,128,129,132,155,177,178,181, sreapieilqrnpdqprrtfreedledlsnslqpilvrpspdtageyqivagerrwraaqraglktvpimvrelddlavleigiienvqradlnvleealsykvlmekfertQeniaqtigkSRShvANtmRllalpdevqsylvsgeltaghaRaiaaaadpvalakqiiegglsVRetEalarka
interface signature	QSRSANRRVRE/QSRSANRRVRE

Estimated binding specificities ?

readout + contact

# IC=19.005 IC/col=1.188 n_of_columns=16

specificity:

A |   0   0   0   0   0   0  68  13   0   0   0  82  96  96   0  96
C |   0   0   0   0   0  96  15  54   0   0   0   0   0   0  96   0
G |   0  96   0   0   0   0  13  13  96   0  96   1   0   0   0   0
T |  96   0  96  96  96   0   0  16   0  96   0  13   0   0   0   0

scan!

home
updated Sat Dec 14 20:31:27 2024