6t2u_BCD : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF THE RECBCD IN COMPLEX WITH CHI-MINUS2 SUBSTRATE
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;Restriction endonuclease-like;
reference complex	6sjf_B 6sjf_C 6sjf_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6t2u_B interface=148,248,333,404,405,541,542,566,724,743,806, aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdeaavftihgfcqrmlnlnafesgmlfeqqLiedesllryqacadfwrrhcyplpreiaqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeldaliessgIdrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgFddmlsrldsalrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyaFRgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlvRSrqeaaqvrdaltlleipsvylsnRdsvfetleaqemlwllqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqivtiHkskgleyplvwlpfitnfRvqeqafyhdrhsfeavldlnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrRgdkkgdtdvhqsalgrllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqfprgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag > 6t2u_C interface=858,875,878,879,1078,1079,1080,1081,1082, mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaanidfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsdkrklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlgqprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllftnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpllaswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsrsdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsyspfiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvlaarfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesaqgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnafflpdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvnictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylflealisaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahltclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrfwahpvraffqmrlqvnfRtedseipdtepfilegLsrYQinqqllnalveqddaerlfrrfraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvqpdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhylsqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegNMMVRgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq > 6t2u_D interface=3,39,232,238,239,245,295,296,436,477,530,550,551, avEhkqlrpldvqfaltvagdehpavtlaaallshdagEghvclplsrlenneashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlHrllgaQPgsqrlRhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasVEagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepdliiqafneyqllcalRegpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiaRndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvHksqgsefdhaalilpsqrtPVvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss
interface signature	LIFFRRSRHRR/RLYQNMMVR/EEHQPRVERRHPV

Estimated binding specificities ?

contact

# IC=23.238 IC/col=0.430 n_of_columns=54

specificity:

A |   0  12   5   0   0   5   0   0  24   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   5  24  24   0   0   0   0   5   0   0
C |   0   5   5   0   0   5   0   0  24   0   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   5  24  24  96   0   0   0  17   0   0
G |   0  10   6   0   0   6   0   0  24   0   0   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  81  24  24   0   0   0   0   5   0   0
T |  96  69  80  96  96  80  96  96  24  96  96  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   5  24  24   0  96  96  96  69  96  96

scan!

home
updated Thu Jul 31 02:05:01 2025