6u8p_AD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF DNMT3B-DNMT3L IN COMPLEX WITH CPGPA DNA
reference	Song et al. 'Nat 11 3355 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=3.05, R-factor=?)
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	6kdb_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6u8p_A interface=94,95,96,97,213,215,216,217, lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface > 6u8p_D interface=94,95,97,213,215,216,217,225, lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVnParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKSNsikqgknQlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface
interface signature	NVNPTKSN/NVPTKSNQ

Estimated binding specificities ?

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# IC=8.472 IC/col=0.530 n_of_columns=16

specificity:

A |   0   0  96  13  24  24  24  24  24  24  24  24  54   0   0   0
C |   0   0   0  13  24  24  24  24  24  24  24  24  16   0  96  96
G |  96  96   0  13  24  24  24  24  24  24  24  24  13   0   0   0
T |   0   0   0  57  24  24  24  24  24  24  24  24  13  96   0   0

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updated Sat Dec 16 18:59:00 2023