6u90_AD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF DNMT3B(N779A)-DNMT3L IN COMPLEX WITH CPGPT DNA
reference	Song et al. 'To ? ? ?
source	HOMO SAPIENS
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;
reference complex	6kdb_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6u90_A interface=94,95,96,97,215, lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtittKsasikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface > 6u90_D interface=94,95,96,97,213,215, lypaipaarrrpirvlslfdgiatgylvlkelgikvgkyvasevceesiavgtvkhegnikyvndvrnitkknieewgpfdlviggspcndlsNVNParkglyegtgrlffefyhllnysrpkegddrpffwmfenvvamkvgdkrdisrflecnpvmidaikvsaahraryfwgnlpgmnrpviaskndklelqdcleynriaklkkvqtiTtKsasikqgknqlfpvvmngkedvlwctelerifgfpvhytdvsnmgrgarqkllgrswsvpvirhlfaplkdyface
interface signature	NVNPK/NVNPTK

Estimated binding specificities ?

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# IC=9.208 IC/col=0.512 n_of_columns=18

specificity:

A |   0  24   0   8   3  20  24  24  24  24  24  24   2  89  90   0  24   0
C |   0  24   0   9   9  36  24  24  24  24  24  24  10   2   2  96  24  96
G |  96  24  96   9   9  20  24  24  24  24  24  24  75   2   2   0  24   0
T |   0  24   0  70  75  20  24  24  24  24  24  24   9   3   2   0  24   0

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updated Tue Sep 10 21:27:12 2024