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legend  pdf

structure nameKAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A MODIFIED KAISO BINDING SEQUENCE (KBS)
(Transcriptional regulator Kaiso)
referenceStanfield et al. Biochemistry 59 1909 2020
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=0.175)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex2lt7_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTSRLEYKNYQRY

Estimated binding specificities ?

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# IC=8.288 IC/col=1.036 n_of_columns=8 specificity:   
A |  13  14   0   1   0   0   0  96
C |  13  82   0  13   0  96  82   0
G |  16   0  96   0  96   0  13   0
T |  54   0   0  82   0   0   1   0
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updated Fri Sep 13 02:31:13 2024