6v8u_A : 3D-footprint complex

structure name	KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A MODIFIED KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Stanfield et al. Biochemistry 59 1909 2020
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=0.175)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6v8u_A interface=27,28,31,53,55,56,59,81,82,83,115,117, ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfpLaEYrtKheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayl
interface signature	TSRLEYKNYQRY

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# IC=8.602 IC/col=1.075 n_of_columns=8

A |   0   0   0   0  80   0   0  48
C |   0  16   0  96   0  96   0  16
G |   0  80  96   0  16   0  96  16
T |  96   0   0   0   0   0   0  16

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updated Tue Dec 17 07:30:38 2024