6vcs_ABE : 3D-footprint complex

structure name	SRA DOMAIN OF UHRF1 IN COMPLEX WITH DNA
reference	Structural Genomics Consortium (SGC)
source	HOMO SAPIENS
experiment	X-ray (resolution=1.70, R-factor=?)
structural superfamily	PUA domain-like;
reference complex	6vcs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6vcs_A interface=1,2,24,30,37,39, PSnhygpipgipvgtmwrfrvqvSesgvhRphvagiHgRsndgayslvlaggyeddvdhgnfftytgsggqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegy > 6vcs_B interface=1,2,24,30,37,39, PSnhygpipgipvgtmwrfrvqvSesgvhRphvagiHgRsndgayslvlaggyeddvdhgnfftytgsgeqscdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegyleal > 6vcs_E interface= NHygpipgipvgtmwrfrvqvseSgvhrpHvagihgRsNdgayslvlaggyeddvdhgnfftytgsgcdqkltntnralalncfapindqegaeakdwrsgkpvrvvrnvkggknskyapaegnrydgiykvvkywpekgksgflvwryllrrdddepgpwtkegkdrikklgltmqypegyl
interface signature	PSSRHR/PSSRHR/NHSHRN

Estimated binding specificities ?

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# IC=3.585 IC/col=0.358 n_of_columns=10

specificity:

A |   0  11  21  24  24  24  24  36  11   0
C |  96  67  21  24  24  24  24  20   9   0
G |   0   9  23  24  24  24  24  20  67  96
T |   0   9  31  24  24  24  24  20   9   0

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updated Sat Dec 16 19:35:38 2023