interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
referenceChen et al. J.Mol.Biol. 432 5499 2020
sourceHOMO SAPIENS
experimentX-ray (resolution=2.10, R-factor=?)
structural superfamilySRF-like;
reference complex1c7u_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRVK/RIQNY

Estimated binding specificities ?

readout + contactlogo
# IC=9.982 IC/col=0.555 n_of_columns=18 specificity:   
A |   9  14  24   0   0   0   0  24  24  24  24  24  24  24   7  96   0   0
C |   7  81  24  22   0   0   7  24  24  24  24  24  24  24  16   0   0  81
G |  73   1  24   1   0   0   0  24  24  24  24  24  24  24   7   0  96   0
T |   7   0  24  73  96  96  89  24  24  24  24  24  24  24  66   0   0  15
scan!

home
updated Sat Dec 16 20:29:05 2023