6wc2_DM : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
reference	Chen et al. J.Mol.Biol. 432 5499 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	SRF-like;
reference complex	1egw_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wc2_D interface=2,14,18,22, gRkkiqitrimdeRnrqVtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrrehr > 6wc2_M interface=1,43,46,47,50, RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYkskr
interface signature	RRVK/RIQNY

Estimated binding specificities ?

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# IC=12.241 IC/col=0.644 n_of_columns=19

specificity:

A |   9  81   0   0  96  24  24  24  24  24  24   9  81  96  96   0  24   2   4
C |  69   4  96   0   0  24  24  24  24  24  24   6   7   0   0   0  24   4  81
G |   9   4   0   0   0  24  24  24  24  24  24  72   4   0   0  96  24  86   4
T |   9   7   0  96   0  24  24  24  24  24  24   9   4   0   0   0  24   4   7

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updated Tue Sep 10 22:52:42 2024