6wc2_IJN : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF A TERNARY MEF2 CHIMERA/NKX2-5/MYOCARDIN ENHANCER DNA COMPLEX
reference	Chen et al. J.Mol.Biol. 432 5499 2020
source	HOMO SAPIENS
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	SRF-like;
reference complex	1egw_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wc2_I interface=2, gRkkiqitrimdernrqvtftkrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrre > 6wc2_J interface=2,18,22, gRkkiqitrimdernrqVtftKrkfglmkkayelsvlcdceialiifnssnklfqyastdmdkvllkyteysephesrtntdiletlkrreh > 6wc2_N interface=1,42,43,46,47,50, RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvKIwfQNrrYksk
interface signature	R/RVK/RKIQNY

Estimated binding specificities ?

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# IC=10.679 IC/col=0.628 n_of_columns=17

specificity:

A |  12   8   8   0   0   0   0   0  24  24  24  24  24  24   8  96   4
C |   0  68   8  17   0   0   0  96  24  24  24  24  24  24   8   0   8
G |  84  12   4   0   0   0   0   0  24  24  24  24  24  24   8   0  70
T |   0   8  76  79  96  96  96   0  24  24  24  24  24  24  72   0  14

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updated Tue Sep 10 22:52:30 2024