6wg7_CDEFGH : 3D-footprint complex

structure name	COORDINATES OF NANR DIMER FITTED IN HEXAMERIC NANR-DNA HETERO-COMPLEX CRYO-EM MAP
source	ESCHERICHIA COLI
experiment	NMR
structural superfamily	GntR ligand-binding domain-like;"Winged helix" DNA-binding domain;
reference complex	6wg7_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wg7_C interface=37,38,39,49,50,53,54,69, nlrsrplarkklsemveeeleqmirrrefgegeqlpSERelmaffnvgRPsvREalaalkrkglvqinNgerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv > 6wg7_D interface=29,30,40,41,42,44, kklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPSvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv > 6wg7_E interface=38,39,49,50,53,69, nlrsrplarkklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPsvRealaalkrkglvqinNgerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv > 6wg7_F interface=37,38,39,49,50,53, nlrsrplarkklsemveeeleqmirrrefgegeqlpSERelmaffnvgRPsvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv > 6wg7_G interface=28,29,30,33,40,41,42,43,44, kklsemveeeleqmirrrefgegeqlpSERelMaffnvgRPSVRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv > 6wg7_H interface=29,30,40,41,44, kklsemveeeleqmirrrefgegeqlpsERelmaffnvgRPsvRealaalkrkglvqinngerarvsrpsadtiigelsgmakdflshpggiahfeqlrlffesslvryaaehatdeqidllakaleinsqsldnnaafirsdvdfhrvlaeipgnpifmaihvalldwliaarptvtdqalhehnnvsyqqhiaivdairrhdpdeadralqshlnsv
interface signature	SERRPREN/ERRPSR/ERRPRN/SERRPR/SERMRPSVR/ERRPR

Estimated binding specificities ?

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# IC=31.503 IC/col=1.260 n_of_columns=25

specificity:

A |  76   0  96   0  96   0   0   0   0   0  96   0  96   0   0   0   0   0   0  96   0  96   0  20  96
C |   1   0   0   0   0  96  96   0   0   0   0   0   0  96  96   0   0   0   0   0   0   0  96  38   0
G |  19   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  96   0   0   0   0   0   0  19   0
T |   0  96   0  96   0   0   0  96  96  96   0  96   0   0   0  96   0  96  96   0  96   0   0  19   0

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updated Tue Sep 10 23:02:02 2024