6wmr_D : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of 'beta and beta-prime subunits of DNA dependent RNA-polymerases', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

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updated Mon Dec 18 18:57:41 2023

structure name	F. TULARENSIS RNAPS70-(MGLA-SSPA)-IGLA DNA COMPLEX
experiment	NMR
structural superfamily	beta and beta-prime subunits of DNA dependent RNA-polymerase;
sequence family	RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4;
multimeric complexes	6wmp_CD
reference complex	6wmp_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6wmr_D interface=199, skkfdiikislaspevirswshgevkkpetinyrtfkperdglfcakifgpikdyeclcgkykrlkhrgvvcercgveveqakvrrermghidlvcpvvhiwylkslpsriglfldmplknvekvlyfesyivtdpgmtplekkqlltdeeyaealenygyefeasmgaeairdlladtdieseiellqaeceeskstAkkekaikrlrlletfqasgnkpewmvmtvlpvlppdlrplvpieggrfatsdlndlyrrvinrnnrlkklldlnapdiivrnekrmlqeavdalldngrrgravtgsnkrplksladmikgkqgrfrqnllgkrvdysgrsvitvgpslrlhecglpkkmalelfkpfvysklrlgghattikqakrmveleeavvwdiletvinehpvllnraptlhrlgiqafeprliegkaiqlhplvcaafnadfdgdqmavhvpltvesqlearvlmmstnnilspasgqpiitptqdivlglyyitrekegargegklfssyedvsraynsgtidihakiklridrqvfdtkgntynekgvvnttvgralllnilpeglsfsllnkvlvkkeiskiinqafrvlggkatvvladklmyagfkystlsgvsvgvddmtipdnkeakieeaekeikqiteqyqsslitenerynniiniwsktsdevgasmmdaiskdtvsingekkeiesfnsvymmaksgargsynqmrqlagmrglmakpdgtmietaitanfreglsvlqyftsthgarkgladtalktanagyltrrlvdvaqdlvvieedcgtddglmfsaivedgevkvplveralgrtlaadvvtekgvvlleagtlldenlvellddngidmikvrspitcktrrglcakcygrdlarerqvnvgesvgviaaqsigepgtqltmglprvaelfearrpkdaailspcdgmvrlgnrdtkekqrieiidknghiveeillpksrhlvvfdgeqvsrgdvladgptdphdllkykgleefadyilieaqsvyrmqgvvindkhietivrqmlrkavildegdskfvkdesielvrileendklrkqgkkeveyelvlmgitrsslstesflsaasfqettrvlteasinsqidnlrglkenvligrlipagtglavrkesakiekmre