| structure name | CRYSTAL STRUCTURE OF DUF1998 HELICASE MRFA BOUND TO DNA (Uncharacterized ATP-dependent helicase YprA) |
| reference | Roske et al. 'Nucleic 49 504 2021 |
| source | Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) |
| experiment | X-ray (resolution=3.16, R-factor=0.222) |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases; |
| sequence family | DEAD/DEAH box helicase; Domain of unknown function DUF1998; Helicase conserved Cterminal domain; |
| multimeric complexes | 6znp_AB 6znq_AB |
| redundant complexes | 6znq_A |
| links to other resources | NAKB  PDIdb DNAproDB |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------DC--HA----------------------NT----FASASCRCSC------DANT +------------------6znp_A +--4 ----------ET--NGRGSGWG--------------ICKC---------------------- ! ! +----------------7aud_E ! +-3 --RARA--DA--------------------------QA------------------------ L +-5 +----------------4qqw_A ! ! --------------------------------SGRT-------------------------- ! ! +-------7enn_K +---6 +-------------1 --------EG--------------------------RG------------------------ ! ! +-------6ftx_W ! ! RC----HC----------------QT------------------------------------ +-7 ! +------------6m6b_M ! ! +---------2 ----------------------RT------------SCPGHC-------------------- L ! ! +------------5v9x_A +-8 ! --------------------------HA--RA------------------------------ L ! ! +--------------------------3kqh_B --9 ! ----------------------QT----WT--LT------------------STFTKT---- ! +---------------------------5vhe_A ! TG------------------------------------------------------------ L +-----------------------------2v1u_A |
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updated Tue Dec 19 16:36:45 2023