7amn_AB : 3D-footprint complex

structure name	STRUCTURE OF LUXR WITH DNA (REPRESSION)
reference	Reverter et al. 'Nucleic 49 3274 2021
source	Vibrio alginolyticus
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7amn_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7amn_A interface=2,4,42,43,44,45,47,48, pRtRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSVATvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci > 7amn_B interface=1,3,41,43,44,46,47, RtRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSvATvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevchdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci
interface signature	RRSVATFN/RRSATFN

Estimated binding specificities ?

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# IC=14.446 IC/col=0.688 n_of_columns=21

specificity:

A |   0   0  96   0   0  24  24  84  76  24  24  24  24   8  68   0  24  96  96  12  92
C |   4   0   0   0   0  24  24   0   4  24  24  24  24   4   8   0  24   0   0  12   0
G |   4   0   0   0   0  24  24   0   8  24  24  24  24  12   8   0  24   0   0  12   4
T |  88  96   0  96  96  24  24  12   8  24  24  24  24  72  12  96  24   0   0  60   0

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updated Fri Jun 26 06:36:56 2026