7amt_AB : 3D-footprint complex

structure name	STRUCTURE OF LUXR WITH DNA (ACTIVATION)
reference	Reverter et al. 'Nucleic 49 3274 2021
source	Vibrio alginolyticus
experiment	X-ray (resolution=2.60, R-factor=?)
structural superfamily	Homeodomain-like;Tetracyclin repressor-like, C-terminal domain;
reference complex	7amn_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7amt_A interface=2,40,42,43,45, tRlspikrkqqlmeialevfarrgigrgghadiaeiaqvSvATvFnyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevcdqhdsehlanlfhgicyslfvqanraaelkhlvnsyldmlc > 7amt_B interface=38,40,43,44, lspikrkqqlmeialevfarrgigrgghadiaeiaqvSvAtvFNyfptredlvdevlnhvvrqfsnflsdnidldlharenianitnamielvsqdchwlkvwfewsastrdevwplfvstnrtnqllvqnmfikaiergevchdsehlanlfhgicyslfvqanraaelkhlvnsyldmlci
interface signature	RSATF/SAFN

Estimated binding specificities ?

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# IC=8.695 IC/col=0.483 n_of_columns=18

specificity:

A |   0  78  24   0  24  24  84  72  24  24  24  24   0  12  24  96  24  78
C |   0   6  24   0  24  24   0   6  24  24  24  24   0   6  24   0  24   6
G |   0   6  24   0  24  24   6  12  24  24  24  24   0  72  24   0  24   6
T |  96   6  24  96  24  24   6   6  24  24  24  24  96   6  24   0  24   6

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updated Tue Jan 6 20:09:37 2026