7aoh_ABY : 3D-footprint complex

structure name	ATOMIC STRUCTURE OF THE POXVIRUS LATE INITIALLY TRANSCRIBING COMPLEX
source	VACCINIA VIRUS GLV-1H68
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;
reference complex	7aoh_S 7aoh_Y
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7aoh_A interface=380,381,748,749, aviskvtyslydqkeinatdiiishvkndddigtvkdgrlgamdgalcktcgktelecfghwgkvsiykthivkpefiseiirllnhicihcgllrsrepysddinlkelsghalrrlkdkilskkkscwnsecmqpyqkitfskkkvcfvnklddinvpnsliyqklisihekfwplleihqypanlfytdyfpippliirpaisfwidsipketneltyllgmivkncnlnadeqviqkavieyddikiisnnttsinlsyitsgknnmirsyivarrkdqtarsvigpstsitvnevgmpayirntltekifvnaftvdkvkqllasnqvkfyfnkrlnqltrirqgkfiknkihllpgdwvevavqeytsiifgrQPslhrynviassirategdtikispgiansqnadfdgdeewmileqnpkavieqsilmypttllkhdihgapvygsiqdeivaayslfriqdlcldevlnilgkygrefdpkgkckfsgkdiytyligekinypgllkdgeiiandvdsnfvvamrhlslagllsdhksnveginfiikssyvfkrylsiygfgvtfkdlrpnstftnkleainvekielikeayakylndvrdgkivplskaleadyvesmlsnltnlnireieehmrqtliddpdnnllkmakagykvnptelmyilgtygqqridgepaetrvlgrvlpyylpdskdpegrgyilnsltkgltgsqyyfsmlvarsqstdivceTSrtgtlarkiikkmedmvvdgygqvvigntlikyaanytkilgsvckpvdliypdesmtwyleisalwnkikqgfvysqkqklakktlapfnflvfvkpttednaikvkdlydmihnviddvrekyfftvsnidfmeyiflthlnpsriritketaitifekfyeklnytlgggtpigiisaqvlsekftqqalssfhtteksgavkqklgfnefnnltnlsknkteiitlvsddisklqsvkinfefvclgelnpnitlrketdkyvvdiivnrlyikraeitelvveymierfisfsvivkewgmetfiedednirftvylnfvepeelnlskfmmvlpgaankgkiskfkipisdytgyddfnqtkklnkmtvelmnlkelgsfdlenvnvypgvwntydifgieaareylceamlntygegfdylyqpcdllasllcasyepesvnkfkfgaastlkratfgdnkallnaalhkksepindnsschffskvpnigtgyykyfidlgllmrm > 7aoh_B interface= emdqrlgykflvpdpkagvfyrplhfqyvsysnfilhrlheiltvkrpllsfknnterimieisnvkvtppdyspiiasikgksydalatftvnifkevmtkegisitkissyegkdshlikiplligygnknpldtakylvpnviggvfinkqsvekvginlvekittwpkfrvvkpnsftfsfssvsppnvlptryrhykisldisqlealnisstktfitvnivllsqylsrvslefirrslsydmppevvylvnaiidsakritesitdfnidtyindlveaehikqksqltinefkyemlhnflphmnytpdqlkgfymisllrkflycifhtsrypdrdsmvchriltygkyfetlahdelenyignirndimNNhknrgtyavnihvlttpglnhafssllsgkfkksdgsyrthphyswmqnisiprsvgfypsvrkyhpsqylyfcssdvpergpqvglvsqlsvlssitniltseyldlekkiceyirsyykddisyfetgfpitienalvaslnpnmicdfvtdfrrrkrmgffgnlevgitlvrdhmneirinigagrlvrpflvvdngelmmdvcpelesrlddmtfsdiqkefphviemvdieqftfsnvcesvqkfrmmskderkqydlcdfpaefrdgyvasslvginhnsgprailgcaqakqaisclssdirnkidngihlmyperpiviskaletskiaancfgqhvtialmsykginqedgiiikkqFIqrggldivtakkhqveiplenfnnkerdrsnaysklesnglvrlnaflesgdamarnissisfdvsekytdmyksrvervqveltdkvkvrvltmkerrpilgdkfttrtsqkgtvayvadetelpydengitpdviinstsifsrktismlieviltaaysakpynnkgenrpvcfpssnetsidtymqfakqcyehsnpklsdeelsdkifcekilydpetdkpyaskvffgpiyylrlrhltqdkatvrcrgkktklirqanegrkrgggikfgemerdcliahgaantitevlkdseedyqdvyvcencgdiaaqikgintclrcsklnlsplltkidtthvskvfltqmnargvkvkldferrppsfykpldkvdlkpsf > 7aoh_Y interface=150,151,279,281, shaayidyalrrttnmpvemmgsdvvrlkdyqhfvarvflgldsmhslllfhetgvgktmttvyilkhlkdiytnwaiillvkkaliedpwmntilryapeitkdcifinyddqnfrnkfftniktinsksricviidechnfisksliKEdgkirptrsvynflsktialknhkmiclsatpivnsvqeftmlvnllrpgslqhqslfenkrlvdekelvsklgglcsyivnnefsifddvegsasfakktvlmryvnmskkqeeiyqkaklaeiktFrIlrrmattftfndfknslrdrefsksaldtfkkgellkgdasaadislftelkeksvkfidvclgilashgkclvfepfvnqsgieilllyfkvfgisniefssrtkdtrikavaefnqesntngeciktcvfsssggegisffsindifildmtwneaslrqivgrairlnshvltpperryvnvhfimarlsngmptvdedlfeiiqskskefvqlfrvfkhtslewihanekdfspidnesgwktlvsraidlsskknitnkliegtniwysnsnrlmsinrgfkgvdgrvydvdgnylhdmikihdgkliyif
interface signature	QPTS/NNFI/KEFI

Estimated binding specificities ?

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# IC=3.501 IC/col=0.269 n_of_columns=13

specificity:

A |   0   0  24  24  24  24  24  24  24  24  24  15   6
C |   0   0  24  24  24  24  24  24  24  24  24  15   6
G |   0  96  24  24  24  24  24  24  24  24  24  49  78
T |  96   0  24  24  24  24  24  24  24  24  24  17   6

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updated Sun Dec 15 02:32:18 2024