| structure name | STRUCTURE OF AN ENGINEERED HELICASE DOMAIN CONSTRUCT FOR HUMAN BLOOM SYNDROME PROTEIN (BLM) (BLOOM SYNDROME PROTEIN,BLOOM SYNDROME PROTEIN) |
| reference | Oliver et al. |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.96, R-factor=0.231) |
| structural superfamily | P-loop containing nucleoside triphosphate hydrolases;HRDC-like; |
| sequence family | DEAD/DEAH box helicase; Helicase conserved Cterminal domain; HRDC domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------ET----NGRGSG------WGFARA--------------------IC--KCHT--TG----RCLC--MCEG--------HGYGFGNTNT +------------7aud_E +----5 ----------HA--------------------------------------NT------------------------------------------ +----8 +------------6znp_A ! ! ------DA------------------------------------------QA------------RASA--------SA--YA------------ L ! +-----------------4qqw_A +-10 RC----HC----------------------QT-------------------------------------------------------------- ! ! +------------6m6b_M ! ! +--6 --RTQT--EG------------QTWTFGRG--KGCGNCSG--KG--------DGRG--DC--WC----CG------EGKG-------------- L ! ! ! +------------6crm_A ! +------7 --------------------------------------------------VC--KC------------MCVC----------EC---------- ! ! +-4u7d_A ! +-------------1 --------------------------------------------------IC--KC----------RTLC------------------------ +-11 +-4o3m_A ! ! ----------------------------------------------SGRT-------------------------------------------- ! ! +------7enn_K ! ! +-----3 ------EG------------------------------------------RG------------------------------------------ ! ! ! +------6ftx_W ! ! +-------4 ----------------------------------------------QT---------------------------------------------- +-12 ! ! ! +---6ne3_W ! ! +---9 +--------2 ------------------HCRT------------------------------------------------------------------------ ! ! ! +---6gen_M ! ! ! --------------------------------------------SG--KT-------------------------------------------- -13 ! +--------------------7amv_W ! ! ------QT--------------------------------WT----LT---------------------------------------------- ! +--------------------------5vhe_A ! ------------------------------------HA------RA------------------------------------------------ L +---------------------------3kqh_B |
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updated Wed Dec 18 08:12:29 2024