7b0c_AB : 3D-footprint complex

structure name	[4FE-4S]-NSRR COMPLEXED TO 23-BP HMPA1 OPERATOR FRAGMENT
reference	Fontecilla-Camps et al.
source	Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2)
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7b0c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7b0c_A interface=41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpyTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd > 7b0c_B interface=40,41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpYTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd
interface signature	THKR/YTHKR

Estimated binding specificities ?

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# IC=2.301 IC/col=0.110 n_of_columns=21

specificity:

A |  54  10  24  24  14  14  34  24  24  24  24  24  24  24  20  10  16  24  22  10  16
C |  14  10  24  24  14  16  22  24  24  24  24  24  24  24  22  10  52  24  25  10  14
G |  14  10  24  24  54  14  20  24  24  24  24  24  24  24  20  10  14  24  22  66  14
T |  14  66  24  24  14  52  20  24  24  24  24  24  24  24  34  66  14  24  27  10  52

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updated Sun Dec 17 00:13:55 2023