7b0c_AB : 3D-footprint complex

structure name	[4FE-4S]-NSRR COMPLEXED TO 23-BP HMPA1 OPERATOR FRAGMENT
reference	Fontecilla-Camps et al.
source	Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2)
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7b0c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7b0c_A interface=41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpyTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd > 7b0c_B interface=40,41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpYTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd
interface signature	THKR/YTHKR

Estimated binding specificities ?

contact

# IC=11.157 IC/col=0.531 n_of_columns=21

specificity:

A |  96   0  24  24   0   0  53  24  24  24  24  24  24  24  10   0   0  24  24   0   0
C |   0   0  24  24   0   0   0  24  24  24  24  24  24  24  21   0  96  24  24   0   0
G |   0   0  24  24  96   0  21  24  24  24  24  24  24  24  21   0   0  24  24  96   0
T |   0  96  24  24   0  96  22  24  24  24  24  24  24  24  44  96   0  24  24   0  96

scan!

home
updated Sun Dec 15 02:40:40 2024