7b0c_AB : 3D-footprint complex

structure name	[4FE-4S]-NSRR COMPLEXED TO 23-BP HMPA1 OPERATOR FRAGMENT
reference	Fontecilla-Camps et al.
source	Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2) / Streptomyces coelicolor A3(2)
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	7b0c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7b0c_A interface=41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpyTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd > 7b0c_B interface=40,41,42,45,60, mrltkftdlalrslmrlavvrdgdeplatrevaevvgvpYTHaaKaitrlqhlgvvearRgrgggltltdlgrrvsvgwlvrelegeaevvdcegdnpcplrgacrlrralrdaqeafyaaldpltvtdlvaaptgpvllgltd
interface signature	THKR/YTHKR

Estimated binding specificities ?

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# IC=2.202 IC/col=0.105 n_of_columns=21

specificity:

A |  52  10  30  24  14  63  34  24  24  24  24  24  24  24  20  52  14  24  24  66  14
C |  14  66  22  24  14  10  22  24  24  24  24  24  24  24  22  16  52  24  24  10  16
G |  14  10  22  24  52  13  20  24  24  24  24  24  24  24  20  14  14  24  24  10  14
T |  16  10  22  24  16  10  20  24  24  24  24  24  24  24  34  14  16  24  24  10  52

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updated Wed Sep 11 02:36:19 2024