interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF HYDROGEN PEROXIDE TREATED ZEBRAFISH TRF2 COMPLEXED WITH DNA
(Terfa protein)
referencePark et al. 'To ? ? ?
sourceDanio rerio
experimentX-ray (resolution=2.44, R-factor=0.230)
structural superfamilyHomeodomain-like;
sequence familyMyblike DNAbinding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRVKDRT

Estimated binding specificities ?

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# IC=7.377 IC/col=0.922 n_of_columns=8 specificity:   
A |  14  66  16   0   0   0   0  96
C |   7   7   7  96  96  96   7   0
G |  14   9   7   0   0   0   7   0
T |  61  14  66   0   0   0  82   0
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updated Tue Dec 19 17:43:33 2023