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legend  pdf

structure nameCRYSTAL STRUCTURE OF HYDROGEN PEROXIDE TREATED ZEBRAFISH TRF2 COMPLEXED WITH DNA
(Terfa protein)
referencePark et al. 'To ? ? ?
sourceDanio rerio
experimentX-ray (resolution=2.44, R-factor=0.230)
structural superfamilyHomeodomain-like;
sequence familyMyblike DNAbinding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRVKDRT

Estimated binding specificities ?

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# IC=7.582 IC/col=0.948 n_of_columns=8 specificity:   
A |   0  96   0   0   0  56  16  64
C |   0   0   0   0   0  16   8   8
G |   0   0  96  96  96   8  16   8
T |  96   0   0   0   0  16  56  16
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updated Sat Sep 14 02:00:35 2024