| structure name | SULFUR BINDING DOMAIN OF SPRMCRA COMPLEXED WITH PHOSPHOROTHIOATED DNA (HNHc domain-containing protein) |
| reference | Zhao et al. 'Nucleic 48 8755 2020 |
| source | Streptomyces pristinaespiralis |
| experiment | X-ray (resolution=2.06, R-factor=0.212) |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KARYHDS |
Estimated binding specificities ?
| readout + contact |  |
A | 0 0 13 24 0 0 13 C | 0 0 13 24 96 0 54 G | 96 96 57 24 0 96 13 T | 0 0 13 24 0 0 16scan! |
Dendrogram of similar interfaces ?
matrix formatKCAG----RC------YC----------------HGDCSG-- L +--7cc9_A +-------------------3 ----------------YC--------------TG-------- ! +--5zmo_A ! ----------------NAST--HTST---------------- L +-6 +3g73_A ! ! +----------1 --------------NAST--RGHTSTLT-------------- L ! ! +------4 +7cby_C ! ! ! ! ----------------------------DARG--------YG L ! +----5 +----------5vfx_A +---7 ! --------------NAST--RGHTSTFT-------------- L ! ! ! +5x07_F ! ! +----------------2 --------------NAST--RGHTSTFT-------------- L +-8 ! +1vtn_C ! ! ! --------YAQTTC--QC------------------------ L ! ! +------------------------5k5q_D --9 ! ----YA----PG--YTRG------------------------ L ! +----------------------------4mte_D ! ------RGRGMCTTRT-------------------------- L +----------------------------4u0y_B |
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updated Wed Dec 18 08:20:24 2024