7cvo_A : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYSTAL STRUCTURE OF ARABIDOPSIS CO CCT DOMAIN IN COMPLEX WITH NF- YB3/YC4 AND FT CORE2 DNA (CHIMERA OF NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 AND...)
reference	Lv et al. 'Plant 33 1182 2021
source	ARABIDOPSIS THALIANA
experiment	X-ray (resolution=2.60, R-factor=0.197)
structural superfamily	Histone-fold;
sequence family	Histonelike transcription factor CBF/; CCT motif; Core histone H2A/H2B/H3/H4;
multimeric complexes	7cvo_AB
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7cvo_A interface=9,114,118,121,123,127,128, hqlplariKkimkadedvrmisaeapilfakacelfileltirswlhaeenkrrtlqkndiaaaitrtdifdflvdivprvtqlspmdrearvlryrekrktrkfektiryasRkayAeiRpRvngRFak

  
  LTRC                                         +3kwq_E    
                                +--------------1 
  LGRA   L       +--------------2              +8he5_a    
                 !              ! 
  --RT         +-3              +--------------8siy_G    
               ! ! 
  LC--       +-4 +-----------------------------8bvw_e    
             ! ! 
  --RT     --5 +-----------------------------8cww_A    
             ! 
  --RG       +-----------------------------7uv9_E

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updated Tue Dec 19 17:51:52 2023